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Snapshot Wisconsin Scientific Publications

A mother black bear leads her three yearling cubs down a trail in the woods.

The millions of photos collected by Snapshot Wisconsin volunteers become valuable data used for wildlife research by DNR scientists and collaborators at universities.

When a researcher finishes a research project and would like to share their findings, they submit a scholarly publication for peer review by the scientific community. Publications are how the science world shares its findings and ensure integrity. Peer review is a long process that can take 3-18 months to complete. 

Scientific publications using Snapshot data have been published on a variety of topics from deer behavior to predator-prey interactions. These important research findings have used the power of this large (and growing) dataset to improve our understanding of wildlife populations and behavior.  The information from these papers can help inform wildlife management in Wisconsin and help other scientists, researchers, and management officials around the world further wildlife research and make decisions. 

Below is a list of known scientific publications that have used Snapshot Wisconsin data in their work. Current and former DNR staff are indicated in bold. An asterisk indicates graduate and post-doctoral students who have worked with Snapshot Wisconsin. 

 

Behavioral Flexibility Facilitates Use Of Spatial and Temporal Refugia During Variable Winter Weather

Gilbert, Neil A.*, Stenglein, J.  L., Van Deelen, T. R., Townsend, P. A., and B. Zuckerberg

Key Findings:

  • Snapshot Wisconsin data were used over two winters to determine how deer changed their behavior during extreme cold and warm events.
  • During extreme cold temperatures, deer became more diurnal and used conifer-dominated landscapes, while on abnormally warm winter days, deer were more nocturnal and used more deciduous landscapes.
  • Deer demonstrated stronger responses to abnormal temperatures later in winter.

 

Human Disturbance Compresses the Spatiotemporal Niche

Gilbert Neil A.*, Stenglein, J.L., Pauli, J.N., and B. Zuckerberg 

Key Findings:

  • Snapshot Wisconsin trail camera data were used to assess how the time between detections for pairs of species changed on a gradient of increasing human disturbance.
  • Pairs averaged fewer days between detections and higher connection (i.e., more co-occurrences between possible species pairs) in high human disturbance landscapes.
  • Human-caused landscape changes may alter the way species interact, decreasing available space and time, leading to increased species interactions.

 

A Phenology of Fear: Investigating Scale and Seasonality in Predator-Prey Games Between Wolves and White-tailed Deer

Clare, J.D.J.*, Zuckerberg, B., Liu, N., Stenglein, J.L., Van Deelen, T.R., Pauli, J.N., and P.A. Townsend

Key Findings:

  • An entire year of Snapshot Wisconsin data was used to understand fine-scale spatial and temporal changes in the use of landscape by deer and wolves.
  • Deer responses to the presence of wolves varied depending on snow, vegetation growth and time of year.
  • Deer were more likely to avoid areas recently used by wolves spring and fall, while less likely to avoid these areas in winter.
  • Deer spent time in rich foraging areas recently used by wolves in summer, mitigating predation risk by increasing vigilance.

Improving Accessibility and Transferability of Machine Learning Algorithms for Identification of Animals in Camera Trap Images: MLWIC2

Tabak, M. A., Norouzzadeh, M. S., Wolfson, D. W., Newton, E. J., Stenglein, J. L., et al.

Key Findings:

  • Machine learning algorithms tend to require advanced skills to use and need improvement to better recognize species in different locations.
  • Three million camera trap images from 18 studies, including Snapshot Wisconsin, in 10 states (U.S.) were used to train two deep neural networks, to create improved models to classify camera trap images.
  • The resulting software (MLWIC2: Machine Learning for Wildlife Image Classification in R) addresses the limitations of using machine learning to classify images and does not require high level programming skills to be used.

 

Identifying Animal Species in Camera Trap Images Using Deep Learning and Citizen Science

Willi, M., Pitman, R. T., Cardoso, A. W., Locke, C., Swanson, A., Boyer, A., Veldthuis, M. and L. Fortson

Key Findings:

  • 497,204 Snapshot Wisconsin images and corresponding metadata were used in this dataset to evaluate the usefulness of deep learning and human effort classifying camera trap images.
  • Combining a trained model with classifications from citizen scientists decreased human effort by 43% while maintaining overall accuracy.
  • Using both deep learning networks and citizen scientists will allow faster processing of large volumes of camera trap data.

 

“How many images do I need?” Understanding How Sample Size Per Class Affects Deep Learning Model Performance Metrics for Balanced Designs in Autonomous Wildlife Monitoring

Shahinfar, S., Meek, P. and G. Falzon

Key Findings:

  • Deep learning algorithms are useful to classify a large volume of wildlife camera trap images, but not enough was known about ideal sample size to train models to classify at certain accuracy levels.
  • Using three datasets, including Snapshot Wisconsin, a formula and guidelines were developed from this experiment to help ecologists add deep learning to their toolbox.

Comparison of In‐Person and Remote Camera Lek Surveys for Prairie Grouse

Stenglein, J. L., Donovan, E. B., Pollentier, C. D., Peltier, T. R., Lee, S.M., McDonnel, A. B., Kardash, L. H., MacFarland, D. M., Hull, S. D.

Key Findings:

  • Compared in-person with trail camera lek surveys to count and estimate maximum number of male prairie grouse.
  • In-person surveys performed better for maximum male counts and survey types performed similarly when accounting for detection probability with N-mixture models.
  • Trail camera lek surveys provide continuous monitoring over lekking season to understand patterns in activity.

 

Integrating Harvest and Camera Trap Data In Species Distribution Models

Gilbert, N. A.*, Pease, B. S., Anhalt-Depies, C., Clare, J. D. J.*, Stenglein, J. L., Townsend, P. A., Van Deelen, T. R., Zuckerberg, B.

Key Findings:

  • Snapshot Wisconsin trail camera data were combined with harvest records to improve inference about species occurrence patterns as related to environmental predictors like canopy cover and impervious surfaces.
  • Community-science camera-trap data can complement existing data sources collected at different scales to provide more precise wildlife population monitoring and support wildlife management decisions.
  • Combining data sources led to increased precision and understanding of species-environment relationships.

 

Abundance Estimation of Unmarked Animals Based on Camera-trap Data

Gilbert, N. A.*, Clare, J. D. J.*, Stenglein, J. L., Zuckerberg, B.

Key Findings:

  • Estimating the abundance of unmarked animals has several challenges and this paper helps practitioners assess the existing methods and choose ones that will best meet their goals.
  • Several methods to estimate abundance exist and after analyzing each, no one method was optimal for camera-trap data under all circumstances.
  • When choosing a method, researchers should consider life history of the focal species, acknowledge what types of data collection are possible and consider whether trends to abundance are acceptable.

 

Generalized Model-based Solutions to False-positive Error in Species Detection/Non-detection Data

Clare, J.D.J.*, Townsend, P.A., and B. Zuckerberg

Key Findings:

  • Unaccounted for false-positive detections that are not accounted for can create large bias in models using presence and absence data.
  • A generalized model-based solution is described that accounts for false-positive error and identifies previous solutions as special cases.

Managing a Large Citizen Science Project to Monitor Wildlife

Locke, C. M., Anhalt-Depies, C. M., Frett, S., Stenglein, J. L., Cameron, S., Malleshappa, V., Peltier, T., Zuckerberg, B., and P.A. Townsend

Key Findings:

  • The Snapshot Wisconsin program is used as a case study to help program managers prepare to launch and run large-scale, long-term citizen science projects.
  • User experience is important, as people are at the heart of citizen science projects.
  • Staff requirements vary among three project phases: planning, growth and maintenance.

 

Tradeoffs And Tools for Data Quality, Privacy, Transparency, and Trust in Citizen Science

Anhalt-Depies C., Stenglein J. L., Zuckerberg B., Townsend P.A. and  A.R. Rissman

Key Findings:

  • Successful citizen-science programs must find balance between collecting and sharing data while maintaining ethical standards and respecting privacy.
  • Before collecting data, program managers should anticipate potential tradeoffs and address by developing policies and practices.
  • We describe the approach the Snapshot Wisconsin program managers take to balance program needs and provide recommendations for others.

 

Making Inferences With Messy (citizen science) Data: When Are Data Accurate Enough and How Can They Be Improved?

Clare, J. D. J.*, Townsend, P. A., Anhalt-Depies, C., Locke, C., Stenglein, J. L., Frett, S., Martin, K. J. Singh, A., Van Deelen, T. R., and B. Zuckerberg

Key Findings:

  • Snapshot Wisconsin crowdsourced animal classifications were assessed for accuracy and most species were found to be reliable for use in downstream analyses without further classification.
  • Data accuracy requirements depend upon the specific research objectives and should be considered in tandem.

 

Use of Latent Profile Analysis To Characterize Patterns of Participation In Crowdsourcing

Anhalt-Depies C., Berland M., Rickenbach M.G., Bemowski R., and A.R. Rissman

Key Findings:

  • Crowdsourcing applications tend to have a small number of individuals responsible for the majority of contributions, also called participation inequality.
  • In the case of Snapshot Wisconsin's Zooniverse webpage, the top 6% of individuals were responsible for over 20% of classifications.
  • Using a technique called latent profile analysis, four distinct patters of participation were found among crowdsourcers; better understanding these patterns can assist with recruitment and retention of volunteers.

Snapshot Wisconsin: Networking Community Scientists and Remote Sensing to Improve Ecological Monitoring and Management

Townsend P., Clare, J. D. J.*, Liu, N., Stenglein, J. L., Anhalt-Depies, C., Van Deelen, T. R., Gilbert, N.A.*, et al

Key Findings:

  • Techniques that remotely monitor the environment (e.g. satellites, trail cameras, audio recorders) can provide more refined data that can be difficult or expensive to obtain using traditional methods.
  • The volume of data, scale, and logistics of operating these types of programs could prove challenging.
  • Snapshot Wisconsin provides a successful example of how natural resource agencies could use trail camera networks to improve wildlife population monitoring and management decisions.

 

Trail Camera Networks Provide Insights Into Satellite-derived Phenology for Ecological Studies

Liu, N., Garcia, M., Singh, A., Clare, J. D. J.*, Stenglein, J. L., Zuckerberg, B., Kruger, E. L., and P. Townsend

Key Findings:

  • Snapshot Wisconsin time-lapse photos were used to assess measurement of ground-level phenology data and provide comparison to phenology data collected via remote sensing.
  • Digital photography at ground-level is a proven approach for tracking plant phenology, and camera-traps could provide another avenue for data collection.
  • Different forest types have variations in seasonal changes in the understory (collected from trail cameras) as compared to the overstory (collected from remote sensing) vegetation.

SNAPSHOT USA 2020: A Second Coordinated National Camera Trap Survey of the United States During COVID-19 Pandemic

Kays, R., Cove, M.V., Diaz, J., Todd, K., Bresnan, C., Snider, M., ..., Stenglein, J.L., Anhalt-Depies,C., ..., W. McShea 

Key Findings:

  • Snapshot Wisconsin data were contributed to a national trail camera dataset for wildlife monitoring.
  • Data collected from camera traps in September and October at 1,485 locations in 43 states; recording 117,415 detections of 78 species of wild mammals.
  • This dataset will be used to explore what drives changes in the distribution of wildlife species and the impacts of species interactions, including between humans and wildlife.

 

SNAPSHOT USA 2019: A Coordinated National Camera Trap Survey of the United States

Cove  M., R. Kays,  H. Bontrager, C. Bresnan, M. Lasky,…, Stenglein, J.L., Anhalt-Depies, C., …, W. McShea

Key Findings;

  • Snapshot Wisconsin data were contributed to a national trail camera data set which consisted of data gathered in September and October across 50 states at 1,509 camera trap sites from 110 camera arrays.
  • 166,036 detections of 83 species of mammals and 17 species of birds, processed through the Smithsonian’s eMammal camera trap data repository.
  • These data will be useful to further wildlife research on population dynamics, communities, human-wildlife interactions and conservation action plans.